Analysis of the breeding gene pool of winter wheat (Triticum aestivum L.) by genes associated with pre-har- vest sprouting resistance
https://doi.org/10.29235/1029-8940-2026-71-1-34-43
Abstract
This study investigated the modern gene pool of winter bread wheat (Triticum aestivum L.) based on the allelic state of the TaMFT-3A, TaMKK3-A, TaMYB10 (R-1) and TaVp-B1 genes associated with preharvest sprouting (PHS) resistance.
The polymorphism of analyzed material was detected by the TaMKK3-A and TaVp-B1 genes. By the TaMKK3-A gene, 15 accessions (50 %) carried the PhsS-allele, and 15 (50 %) had the PhsR-allele. By the TaVp-B1 gene, 6 accessions (20 %) exhibited the PhsS-allele, while 14 (80 %) possessed the PhsR-allele. The breeding material was monomorphic by the TaMFT-3A and TaMYB10 (R-1) genes. At the SNP –222 locus of TaMFT-3A, all accessions carried the PhsS-allele. Additionally, all samples displayed a distinct red grain color, associated with the presence of PhsR-alleles of the TaMYB10 (R-1) gene. As a result of the DNA marking of the modern wheat gene pool for the TaMFT-3A, TaMKK3-A, and TaVp-B1 genes, along with the visual grain color assessment (TaMYB10 (R-1)), 14 potentially most PHS-resistant accessions were identified, carrying the most favorable allelic combinations by all the genes analyzed.
The data obtained can be applied in the practical breeding of winter bread wheat for improved preharvest sprouting resistance.
About the Authors
I. S. GordejBelarus
Igor S. Gordej ‒ Ph. D. (Biol.), Associate Professor, Head of Laboratory
27, Akademicheskaya Str., 220072, Minsk
O. M. Lyusikov
Belarus
Oleg M. Lyusikov ‒ Researcher
27, Akademicheskaya Str., 220072, Minsk
O. S. Matieuskaya
Belarus
Olga S. Matieuskaya – Junior Researcher
27, Akademicheskaya Str., 220072, Minsk
V. E. Shimko
Belarus
Victoria E. Shimko ‒ Researcher
27, Akademicheskaya Str., 220072, Minsk
V. S. Mandrusova
Belarus
Victoria S. Mandrusova ‒ Junior Researcher
27, Akademicheskaya Str., 220072, Minsk
А. V. Sokolyuk
Belarus
Anna V. Sokolyuk – Junior Researcher
27, Akademicheskaya Str., 220072, Minsk
T. E. Varfalameyeva
Belarus
Tatyana E. Varfalameyeva – Junior Researche
27, Akademicheskaya Str., 220072, Minsk
References
1. Krupnov V. A., Antonov G. Yu., Druzhin A. E., Krupnova O. V. Preharvest sprouting resistance in spring bread wheat carrying chromosome 6Agi(6D) from Agropyron intermedium. Vavilovskii zhurnal genetiki i selektsii = Vavilov Journal of Genetics and Breeding, 2012, vol. 16, no. 2, pp. 444–450 (in Russian).
2. Black M. The Encyclopedia of Seeds Science: Technology and Uses. Wallingford, UK: CABI, 2006. 828 p.
3. Vetch J. M., Stougaard R. N., Martin J. M., Giroux M. J. Revealing the genetic mechanisms of pre-harvest sprouting in hexaploid wheat (Triticum aestivum L.). Plant Science, 2019, vol. 281, pp. 180–185. https://doi.org/10.1016/j.plantsci.2019.01.004
4. Kocheshkova A. A., Kroupin P. Yu., Bazhenov M. S., Karlov G. I., Pochtovyy A. A., Upelniek V. P., Belov V. I., Divashuk M. G. Pre-harvest sprouting resistance and haplotype variation of ThVp-1 gene in the collection of wheat-wheatgrass hybrids. PLoS ONE, 2017, vol. 12, no. 11, art. E0188049. https://doi.org/10.1371/journal.pone.0188049
5. Brown L. K., Wiersma A. T., Olson E. L. Preharvest sprouting and α-amylase activity in soft winter wheat. Journal of Cereal Science, 2018, vol. 79, pp. 311–318. https://doi.org/10.1016/j.jcs.2017.11.016
6. Cheng X., Wang S., Xu D., Liu X., Li X., Xiao W. [et al.]. Identification and analysis of the GASR gene family in common wheat (Triticum aestivum L.) and characterization of TaGASR34, a gene associated with seed dormancy and germination. Frontiers in Genetics, 2019, vol. 10, art. 980. https://doi.org/10.3389/fgene.2019.00980
7. Liu X., Wang J., Yu Y., Kong L., Liu Y., Liu Z., Li H., Wei P., Liu M., Zhou H., Bu Q., Fang J. Identification and characterization of the rice pre-harvest sprouting mutants involved in molybdenum cofactor biosynthesis. New Phytologist, 2019, vol. 222, no. 1, pp. 275–285. https://doi.org/10.1111/nph.15607
8. Nakamura S. Grain dormancy genes responsible for preventing pre-harvest sprouting in barley and wheat. Breeding Science, 2018, vol. 68, no. 3, pp. 295–304. https://doi.org/10.1270/jsbbs.17138
9. Gubler F., Millar A. A., Jacobsen J. V. Dormancy release, ABA and pre-harvest sprouting. Current Opinion in Plant Biology, 2005, vol. 8, no. 2, pp. 183–187. https://doi.org/10.1016/j.pbi.2005.01.011
10. Li C., Ni P., Francki M., Hunter A., Zhang Y., Schibeci D. [et al.]. Genes controlling seed dormancy and pre-harvest sprouting in a rice-wheat-barley comparison. Functional and Integrative Genomics, 2004, vol. 4, no. 2, pp. 84–93. https://doi.org/10.1007/s10142-004-0104-3
11. Mares D. J., Mrva K. Wheat grain pre-harvest sprouting and late maturity alpha-amylase. Planta, 2014, vol. 240, no. 6, pp. 1167–1178. https://doi.org/10.1007/s00425-014-2172-5
12. Lin M., Liu S., Zhang G., Bai G. Effects of TaPHS1 and TaMKK3-A Genes on Wheat Pre-Harvest Sprouting Resistance. Agronomy, 2018, vol. 8, no. 10, p. 210. https://doi.org/10.3390/agronomy8100210
13. Torada A., Ikeguchi S., Koike M. Mapping and validation of PCR-based markers associated with a major QTL for seed dormancy in wheat. Euphytica, 2005, vol. 143, pp. 251–255. https://doi.org/10.1007/s10681-005-7872-2
14. Lin M., Zhang D., Liu S., Zhang G., Yu J., Fritz A.K., Bai G. Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat. BMC Genomics, 2016, vol. 17, art. 794. https://doi.org/10.1186/s12864-016-3148-6
15. Feng Y., Qu R., Liu S., Yang Y. Rich haplotypes of Viviparous‐1 in Triticum aestivum subsp. spelta with different abscisic acid sensitivities. Journal of the Science Food and Agriculture, 2017, vol. 97, no. 2, pp. 497–504. https://doi.org/10.1002/jsfa.7751
16. Zhou S., Fu L., Wu Q., Chen J., Chen Y., Xie J. [et al.]. QTL mapping revealed TaVp-1A conferred pre-harvest sprouting resistance in wheat population Yanda 1817× Beinong 6. Journal of Integrative Agriculture, 2017, vol. 16., no. 2, pp. 435–444. https://doi.org/10.1016/S2095-3119(16)61361-8
17. Nakamura S., Abe F., Kawahigashi H., Nakazono K., Tagiri A., Matsumoto T. [et al.]. A wheat homolog of MOTHER OF FT and TFL1 acts in the regulation of germination. The Plant Cell, 2011, vol. 23, no. 9, pp. 3215–3229. https://doi.org/10.1105/tpc.111.088492
18. Shorinola O., Balcárková B., Hyles J., Tibbits J. F. G., Hayden M. J., Holušova K., Valárik M., Distelfeld A., Torada A., Barrero J. M., Uauy C. Haplotype analysis of the pre-harvest sprouting resistance locus Phs-A1 reveals a causal role of TaMKK3-A in global germplasm. Frontiers in Plant Science, 2017, vol. 8, art. 1555. https://doi.org/10.3389/fpls.2017.01555
19. Yang Y., Zhang C. L., Liu S. X., Sun Y. Q., Meng J. Y., Xia L. Q. Characterization of the rich haplotypes of Viviparous-1A in Chinese wheats and development of a novel sequence-tagged site marker for pre-harvest sprouting resistance. Molecular Breeding, 2014, vol. 33, no. 1, pp. 75–88. https://doi.org/10.1007/s11032-013-9935-8
20. Liu S., Sehgal S. K., Li J., Lin M., Trick H. N., Yu J., Gill B. S., Bai G. Cloning and Characterization of a Critical Regulator for Preharvest Sprouting in Wheat. Genetics, 2013, vol. 195, no. 1, pp. 263–273. https://doi.org/10.1534/genetics.113.152330
21. Liu F., Zhang H., Ding L., Soppe W. J. J., Xiang Y. REVERSAL OF RDO5 1, a Homolog of Rice Seed Dormancy4, Interacts with bHLH57 and Controls ABA Biosynthesis and Seed Dormancy in Arabidopsis. The Plant Cell, 2020, vol. 32, no. 6, pp. 1933–1948. https://doi.org/10.1105/tpc.20.00026
22. Torada A., Koike M., Ogawa T., Takenouchi Y., Tadamura K., Wu J., Matsumoto T., Kawaura K., Ogihara Y. A Causal Gene for Seed Dormancy on Wheat Chromosome 4A Encodes a MAP Kinase Kinase. Current Biology, 2016, vol. 26, no. 6, pp. 782–787. https:// doi.org/10.1016/j.cub.2016.01.063
23. Nakamura S., Pourkheirandish M., Morishige H., Kubo Y., Nakamura M., Ichimura K. [et al.]. Mitogen-Activated Protein Kinase Kinase 3 Regulates Seed Dormancy in Barley. Current Biology, 2016, vol. 26, no. 6, pp. 775–781. https://doi.org/10.1016/j.cub.2016.01.024
24. Himi E., Maekawa M., Miura H., Noda K. Development of PCR markers for Tamyb10 related to R-1, red grain color gene in wheat. Theoretical and Applied Genetics, 2011, vol. 122, no. 8, pp. 1561–1576. https://doi.org/10.1007/s00122-011-1555-2
25. Wang Y., Wang X. L., Meng J. Y., Zhang Y. J., He Z. H., Yang Y. Characterization of Tamyb10 allelic variants and development of STS marker for pre-harvest sprouting resistance in Chinese bread wheat. Molecular Breeding, 2016, vol. 36, no. 11, art. 148. https://doi.org/10.1007/s11032-016-0573-9
26. Dong Z. D., Chen J., Li T., Chen F., Cui D. Q. Molecular survey of Tamyb10-1 genes and their association with grain colour and germinability in Chinese wheat and Aegilops tauschii. Journal of Genetics, 2015, vol. 94, no. 3, pp. 453–459. https://doi.org/10.1007/s12041-015-0559-0
27. Fedyaeva A. V., Afonnikova S. D., Afonnikov D. A., Smirnova O. G., Deeva V. N., Pryanishnikov A. I., Salina E. A. Biochemical, genetic and digital evaluation of soft winter wheat varieties with different germination index. Russian Journal of Plant Physiology, 2024, vol. 71, no. 2, art. 56. https://doi.org/10.1134/S1021443724604592
28. Flintham J. E. Different genetic components control coat-imposed and embryo-imposed dormancy in wheat. Seed Science Research, 2000, vol. 10, no. 1, pp. 43–50. https://doi.org/10.1017/S0960258500000052
29. Warner R. L., Kudrna D. A., Spaeth S. C., Jones S. S. Dormancy in wheat grain-mutant of Chinese spring wheat (Triticum aestivum L.). Seed Science Research, 2000, vol. 10, no. 1, pp. 51–60. https://doi.org/10.1017/S0960258500000064
30. Himi E., Mares D. J., Yanagisawa A., Noda K. Effect of grain colour gene (R) on grain dormancy and sensitivity of the embryo to abscisic acid (ABA) in wheat. Journal of Experimantal Botany, 2002, vol. 53, no. 374, pp. 1569–1574. https://doi.org/10.1093/jxb/erf005
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